Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51004162_51006145_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51004162 - 51006145

Intron Length:

1984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCTCTTTTGACT

Flanking Amino Acid:

CKDCSFYTGFKSAFTMHVEA

Intron Amino Acid Position:

2126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

87.3

26.9

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

80.1

0.68

0.8

74.8

33.6

Minor 5ss

40.1

-1.1

2.8

53.2

37.3

Minor BPS

61.3

0.44

1.3

71.32

40.4

Associated Gene:

Gene:

ZNF462

Ensembl Gene ID:

ENSAPLG00000016551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022670

50989749 - 51082577

92829

ENSAPLT00000019074

50989749 - 51082577

92829

ENSAPLT00000045776

50993774 - 51043692

49919