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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51043693_51081999_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

51043693 - 51081999

Intron Length:

38307

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTTTCTTGCAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

0.57

73.6

28.6

Major PPT

92.6

0.96

0.6

88.3

21.3

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

-0.6

3.5

66.96

Associated Gene:

Gene:

ZNF462

Ensembl Gene ID:

ENSAPLG00000016551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022670

50989749 - 51082577

92829

ENSAPLT00000019074

50989749 - 51082577

92829