Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51261200_51262062_F

Intron Information:

Intron Rank:

143767

Intron Class:

major

Intron Phase:

Intron Coordinates:

51261200 - 51262062

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTCTGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTTTTCCCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

CCTTACACAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.3

66.8

40.4

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

86.6

0.82

0.6

81.5

30.5

Minor 5ss

36.1

-1.6

2.5

41.6

Minor BPS

48.6

-0

70.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032319

51261043 - 51262735

1693

ENSAPLT00000031395

51261043 - 51262735

1693