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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51289012_51294938_R

Intron Information:

Intron Rank:

138227

Intron Class:

major

Intron Phase:

Intron Coordinates:

51289012 - 51294938

Intron Length:

5927

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTACTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

CTTTTCCTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

76.8

31.8

Major BPS

68.8

0.47

1.2

63.4

Major PPT

82.2

0.72

0.8

76.3

31.9

Minor 5ss

33.1

-1.9

3.1

38.4

40.8

Minor BPS

52.8

0.17

75.59

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021896

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022279

51288588 - 51295555

6968