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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_513128_513453_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
513128 - 513453

Intron Length:
326

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGC|GTGAGTGCC

5'SS Class:
major

3'SS Sequence:
CTTCCCCCTCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAC

U12 Branch Point Sequence:
CATATGCTAACG

Flanking Amino Acid:
TETGWSCYYCDNLNLLLTEE

Intron Amino Acid Position:
259

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.3
0.34
1.3
60.2
39.4

Major BPS
69.4
0.48
1.1
69.6
35.5

Major PPT
75.1
0.57
0.7
66.5
29.9

Minor 5ss
29.4
-2.4
3
31.4
35.2

Minor BPS
42.4
-0.7
2.3
49.43
44.1

Associated Gene:

Gene:
PHF24

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

511013 - 518643
7631

511013 - 514930
3918