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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5138421_5139011_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5138421 - 5139011

Intron Length:

591

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGCATGAC

5'SS Class:

weak_major

3'SS Sequence:

CGCCCTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

CGCCCTTCTACA

Flanking Amino Acid:

QNRGGWDLPLSQRNARIVTT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.9

0.07

1.1

50.4

34.6

Major BPS

73.5

0.58

79.3

29.4

Major PPT

74.7

0.56

0.8

67.7

32.4

Minor 5ss

-2.5

3.4

38.5

41.3

Minor BPS

44.4

-0.4

1.8

49.51

41.2

Associated Gene:

Gene:

CCDC68

Ensembl Gene ID:

ENSAPLG00000010764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011223

5137567 - 5142990

5424