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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5139155_5140247_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5139155 - 5140247

Intron Length:

1093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTGTG

5'SS Class:

major

3'SS Sequence:

TGTTCCCTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

GATCCCGTAACC

Flanking Amino Acid:

LTEEAEYVKKQHPPVPGRSA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

70.7

39.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

80.6

0.69

0.8

78.2

30.6

Minor 5ss

42.5

-0.8

3.1

57.9

46.8

Minor BPS

58.5

0.25

2.1

70.29

40.4

Associated Gene:

Gene:

CCDC68

Ensembl Gene ID:

ENSAPLG00000010764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011223

5137567 - 5142990

5424

ENSAPLT00000011219

5136748 - 5142990

6243

ENSAPLT00000011214

5135114 - 5142822

7709