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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5141007_5141425_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5141007 - 5141425

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGAGGC

5'SS Class:

major

3'SS Sequence:

TTTATTTCCTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTGTTTTTATTT

Flanking Amino Acid:

MEQRVRRMEEEKKTLMEKKT

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

60.3

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.9

0.72

0.7

81.6

30.2

Minor 5ss

23.9

-3

3.3

32.2

42.7

Minor BPS

56.7

0.29

1.6

70.24

42.1

Associated Gene:

Gene:

CCDC68

Ensembl Gene ID:

ENSAPLG00000010764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011214

5135114 - 5142822

7709

ENSAPLT00000011223

5137567 - 5142990

5424

ENSAPLT00000011219

5136748 - 5142990

6243