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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5142341_5142540_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5142341 - 5142540

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCCA

5'SS Class:

strong_major

3'SS Sequence:

TTCCCCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTACAT

U12 Branch Point Sequence:

TTTGCATTACAT

Flanking Amino Acid:

TEKVTALETQNKELKDKVAL

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

Major BPS

73.9

0.59

30.2

Major PPT

79.7

0.67

0.7

73.5

24.7

Minor 5ss

-2.2

3.2

39.6

45.9

Minor BPS

0.14

2.1

78.39

43.5

Associated Gene:

Gene:

CCDC68

Ensembl Gene ID:

ENSAPLG00000010764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011214

5135114 - 5142822

7709

ENSAPLT00000011223

5137567 - 5142990

5424

ENSAPLT00000011219

5136748 - 5142990

6243