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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51425953_51427904_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51425953 - 51427904

Intron Length:

1952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTA|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTGATTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

GTTTGTTTGATT

Flanking Amino Acid:

PETNELLKMSYPVKVTLIGA

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

83.4

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

79.8

0.67

0.9

70.1

44.9

Minor 5ss

-0.2

2.8

68.9

36.6

Minor BPS

61.4

0.44

1.8

79.17

37.6

Associated Gene:

Gene:

TMEM38B

Ensembl Gene ID:

ENSAPLG00000019198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038390

51423696 - 51438316

14621

ENSAPLT00000027119

51423696 - 51438312

14617