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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5142618_5142755_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5142618 - 5142755

Intron Length:

138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGCC

5'SS Class:

major

3'SS Sequence:

CTTCACTCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

CTCTGCTTCACT

Flanking Amino Acid:

KTKVSKAVLTDPLRDYRASP

Intron Amino Acid Position:

327

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

37.2

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

75.4

0.57

0.8

69.3

30.9

Minor 5ss

29.8

-2.3

3.1

32.5

35.7

Minor BPS

54.3

0.22

2.2

75.03

47.8

Associated Gene:

Gene:

CCDC68

Ensembl Gene ID:

ENSAPLG00000010764

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011214

5135114 - 5142822

7709

ENSAPLT00000011223

5137567 - 5142990

5424

ENSAPLT00000011219

5136748 - 5142990

6243