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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51484615_51485880_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
51484615 - 51485880

Intron Length:
1266

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTACATAGA

5'SS Class:
major

3'SS Sequence:
TTTTGCCTTCTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAT

U12 Branch Point Sequence:
TTTTTATGAGCA

Flanking Amino Acid:
GLPLKHKFGKVEDSLELSFQ

Intron Amino Acid Position:
410

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.2
0.64
1
71.5
40.2

Major BPS
96.5
1.15
0.6
86
34.2

Major PPT
82.2
0.73
0.8
74.3
36.5

Minor 5ss
33.4
-1.9
3
42.9
44

Minor BPS
52.6
0.08
1.9
73.43
37.9

Associated Gene:

Gene:
FKTN

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51480087 - 51495609
15523