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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5148492_5149567_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5148492 - 5149567

Intron Length:

1076

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTCGA

5'SS Class:

major

3'SS Sequence:

TTTTTCCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

ATTCCCTTAATT

Flanking Amino Acid:

QSFLNVRNWMSQLQANAYCE

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

62.6

43.8

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

88.6

0.87

0.6

Minor 5ss

34.9

-1.7

2.9

37.8

40.8

Minor BPS

83.9

1.14

92.25

29.5

Associated Gene:

Gene:

RAB27B

Ensembl Gene ID:

ENSAPLG00000023455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033425

5146254 - 5165191

18938

ENSAPLT00000044156

5146254 - 5152983

6730