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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51487150_51488622_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
51487150 - 51488622

Intron Length:
1473

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTAGTGGT

5'SS Class:
strong_major

3'SS Sequence:
CTTTGCCTTCTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTGAT

U12 Branch Point Sequence:
AGTAGCTTACCT

Flanking Amino Acid:
RYREARAFFQLYPDDASVDA

Intron Amino Acid Position:
322

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83.4
0.79
1.1
77.3
37.8

Major BPS
78.6
0.71
1.2
71.4
45.1

Major PPT
78.5
0.64
0.8
70
36.5

Minor 5ss
30.8
-2.2
3.1
41.8
44.7

Minor BPS
50.3
0.09
2.1
71.97
44.5

Associated Gene:

Gene:
FKTN

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51480087 - 51495609
15523