Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51505680_51507249_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51505680 - 51507249

Intron Length:

1570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATCT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTGACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTGTCTTGACC

Flanking Amino Acid:

YSDPVTLETKAFVFGLDDTS

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

31.3

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

71.7

0.49

66.5

Minor 5ss

39.9

-1.1

3.2

57.4

46.8

Minor BPS

73.9

0.74

1.3

81.07

33.8

Associated Gene:

Gene:

FSD1L

Ensembl Gene ID:

ENSAPLG00000013516

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026860

51498929 - 51525579

26651

ENSAPLT00000014109

51498929 - 51525579

26651