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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5150688_5152830_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5150688 - 5152830

Intron Length:

2143

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTCTCTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTGAT

U12 Branch Point Sequence:

CATGCGTTTACT

Flanking Amino Acid:

VGIDFREKRVVYNSRGANGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

72.3

37.7

Major BPS

83.5

0.83

0.8

71.6

36.4

Major PPT

75.8

0.58

0.9

76.9

31.7

Minor 5ss

33.2

-1.9

3.2

40.6

40.8

Minor BPS

47.4

-0.1

2.4

68.58

47.9

Associated Gene:

Gene:

RAB27B

Ensembl Gene ID:

ENSAPLG00000023455

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044156

5146254 - 5152983

6730

ENSAPLT00000033425

5146254 - 5165191

18938