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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51510634_51512810_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
51510634 - 51512810

Intron Length:
2177

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACAGTAC

5'SS Class:
major

3'SS Sequence:
TTCTTGACTTTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAT

U12 Branch Point Sequence:
GCTTTCTTGACT

Flanking Amino Acid:
FSKAARQIKDRITACPAFRI

Intron Amino Acid Position:
123

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.2
0.5
1.1
63.5
37.6

Major BPS
79.3
0.73
1.1
77.9
34.9

Major PPT
76.7
0.6
0.8
74.7
34.9

Minor 5ss
35.3
-1.7
3.5
49.3
47.2

Minor BPS
76
0.9
1.1
83.36
37.8

Associated Gene:

Gene:
FSD1L

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

51498929 - 51525579
26651