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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51548378_51549867_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51548378 - 51549867

Intron Length:

1490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTTCACATTATT

Flanking Amino Acid:

REFYMDKVLMEFVENSRKSM

Intron Amino Acid Position:

760

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.8

80.1

28.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

82.9

0.74

0.9

80.2

37.3

Minor 5ss

39.5

-1.2

2.9

49.4

41.4

Minor BPS

48.5

-0

2.1

76.01

Associated Gene:

Gene:

SLC44A1

Ensembl Gene ID:

ENSAPLG00000013724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042315

51545903 - 51606167

60265

ENSAPLT00000014317

51542660 - 51606167

63508