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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51553301_51553546_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51553301 - 51553546

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TATGCTTTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTTAT

U12 Branch Point Sequence:

TTTCCCCCCACA

Flanking Amino Acid:

MYIHTQLKGKENACARCMLK

Intron Amino Acid Position:

607

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

74.1

29.5

Major BPS

87.7

0.94

0.8

77.7

36.7

Major PPT

73.5

0.53

0.9

65.9

40.5

Minor 5ss

31.5

-2.1

3.4

38.4

40.9

Minor BPS

47.6

-0.1

2.3

70.3

41.4

Associated Gene:

Gene:

SLC44A1

Ensembl Gene ID:

ENSAPLG00000013724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042315

51545903 - 51606167

60265

ENSAPLT00000014317

51542660 - 51606167

63508