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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51557173_51558801_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51557173 - 51558801

Intron Length:

1629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

CATTAATTTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

ACCTCATTAATT

Flanking Amino Acid:

ITVLLFLGTTGNPVPNEEGF

Intron Amino Acid Position:

499

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

35.3

Major BPS

80.4

0.76

80.3

31.8

Major PPT

72.2

0.5

0.9

62.9

42.7

Minor 5ss

33.8

-1.8

2.9

43.7

43.6

Minor BPS

0.55

1.6

75.24

41.9

Associated Gene:

Gene:

SLC44A1

Ensembl Gene ID:

ENSAPLG00000013724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014317

51542660 - 51606167

63508

ENSAPLT00000042315

51545903 - 51606167

60265