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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51561990_51563757_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51561990 - 51563757

Intron Length:

1768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAATTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GCTTATTTCATT

Flanking Amino Acid:

IIMGLCLLSLVLSMILMVII

Intron Amino Acid Position:

364

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

87.2

27.3

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

94.4

0.6

87.9

29.4

Minor 5ss

38.7

-1.3

3.4

58.4

46.2

Minor BPS

49.7

0.06

1.9

68.98

42.6

Associated Gene:

Gene:

SLC44A1

Ensembl Gene ID:

ENSAPLG00000013724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014317

51542660 - 51606167

63508

ENSAPLT00000042315

51545903 - 51606167

60265