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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51563928_51568240_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51563928 - 51568240

Intron Length:

4313

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATTA

5'SS Class:

strong_major

3'SS Sequence:

CTTGTGTCACCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTTCTGATTT

Flanking Amino Acid:

KLCPKYPVPESAPIPFFHRC

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

79.7

29.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

70.4

0.46

62.7

43.1

Minor 5ss

41.6

-0.9

3.1

56.5

47.5

Minor BPS

0.52

1.7

84.31

36.7

Associated Gene:

Gene:

SLC44A1

Ensembl Gene ID:

ENSAPLG00000013724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042315

51545903 - 51606167

60265

ENSAPLT00000014317

51542660 - 51606167

63508