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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51568335_51577921_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51568335 - 51577921

Intron Length:

9587

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGAAA

5'SS Class:

major

3'SS Sequence:

CCCCTCTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCCAC

U12 Branch Point Sequence:

TTTTTCCCACCA

Flanking Amino Acid:

ADVQKFAETNGSTLCSYELQ

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

69.3

36.5

Major BPS

62.4

0.31

1.2

72.4

34.6

Major PPT

69.8

0.45

0.9

64.8

29.3

Minor 5ss

37.8

-1.4

3.1

44.4

45.6

Minor BPS

-0

2.1

71.95

40.1

Associated Gene:

Gene:

SLC44A1

Ensembl Gene ID:

ENSAPLG00000013724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042315

51545903 - 51606167

60265

ENSAPLT00000014317

51542660 - 51606167

63508