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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51589250_51605711_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51589250 - 51605711

Intron Length:

16462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCACACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

ACGTCGTTAACT

Flanking Amino Acid:

AMGCCSSAAQSSKREWKPLE

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

69.3

35.8

Major BPS

0.87

0.8

85.6

Major PPT

59.8

0.22

1.1

58.7

36.1

Minor 5ss

32.2

-2

3.3

41.8

45.1

Minor BPS

63.3

0.49

2.1

77.95

44.5

Associated Gene:

Gene:

SLC44A1

Ensembl Gene ID:

ENSAPLG00000013724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042315

51545903 - 51606167

60265

ENSAPLT00000014317

51542660 - 51606167

63508