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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51716904_51717760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51716904 - 51717760

Intron Length:

857

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGTCTA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTCCATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCGTAT

U12 Branch Point Sequence:

TTTCCCGTATCT

Flanking Amino Acid:

PGIVGNFNASIVSRLFSDAK

Intron Amino Acid Position:

101

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.71

76.1

34.8

Major BPS

46.6

-0.2

1.4

42.9

40.1

Major PPT

76.3

0.59

0.9

75.3

34.1

Minor 5ss

34.8

-1.7

3.1

45.7

42.5

Minor BPS

58.2

0.34

2.3

85.49

40.8

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886