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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51717883_51735397_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51717883 - 51735397

Intron Length:

17515

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGGCA

5'SS Class:

major

3'SS Sequence:

TGTCACTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

TTGCCCTGACCA

Flanking Amino Acid:

LRKLGNSSGSDLKLRDFLVD

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.6

36.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

80.9

0.69

0.9

77.2

36.7

Minor 5ss

29.6

-2.3

3.4

39.3

Minor BPS

56.5

0.2

1.8

69.89

42.1

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886