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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5172605_5172889_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5172605 - 5172889

Intron Length:

285

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCTTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

TTTTCCTTACAG

Flanking Amino Acid:

LILAYSTGDQLETLRMNDYF

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

82.1

24.6

Major BPS

0.57

73.6

28.6

Major PPT

89.7

0.89

0.6

84.1

24.1

Minor 5ss

27.3

-2.6

2.7

30.6

42.8

Minor BPS

68.9

0.46

1.8

76.73

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040762

5171491 - 5178275

6785