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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5173040_5173408_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5173040 - 5173408

Intron Length:

369

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGCCT

5'SS Class:

major

3'SS Sequence:

TTCCTTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

TTCCTTGCAACA

Flanking Amino Acid:

MGYVISGCGQAGVITSSGAT

Intron Amino Acid Position:

375

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

68.9

41.6

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

73.2

0.52

0.9

69.2

35.7

Minor 5ss

33.5

-1.9

3.4

48.9

46.7

Minor BPS

45.3

-0.3

2.1

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040762

5171491 - 5178275

6785