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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5174513_5175060_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5174513 - 5175060

Intron Length:

548

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTAG

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAA

U12 Branch Point Sequence:

CATCTGTCAACT

Flanking Amino Acid:

PEDIAARALKPQGGVNFIRT

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

67.6

40.3

Major BPS

63.3

0.33

1.2

39.8

Major PPT

75.5

0.57

0.9

69.9

36.6

Minor 5ss

49.3

-0

2.5

63.6

48.1

Minor BPS

46.7

-0.1

2.2

66.43

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040762

5171491 - 5178275

6785