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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51750231_51750764_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51750231 - 51750764

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTCTCCTCCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

TATTCAGCCACT

Flanking Amino Acid:

DVTNFYDNSTTPYCNELMKN

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

84.3

26.3

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

78.8

0.65

0.7

76.6

25.5

Minor 5ss

-1.4

3.3

49.4

41.3

Minor BPS

42.3

-0.5

2.7

70.77

45.5

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886