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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5175295_5175735_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5175295 - 5175735

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCCTG

5'SS Class:

major

3'SS Sequence:

GATCGTGTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTTGTTAAATT

Flanking Amino Acid:

NANEHGYLQQGTAWIGVIGA

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.1

58.1

46.2

Major BPS

100

1.24

0.5

100

Major PPT

69.3

0.43

60.7

44.5

Minor 5ss

47.6

-0.2

2.8

46.3

Minor BPS

53.6

0.19

2.1

75.88

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030416

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040762

5171491 - 5178275

6785