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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51756356_51756446_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51756356 - 51756446

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGGCCT

5'SS Class:

major

3'SS Sequence:

GTTGCCTTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

GGATTTCTAACA

Flanking Amino Acid:

NVERTNKIKDGYWDPGPRAD

Intron Amino Acid Position:

573

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

63.1

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

70.2

0.46

1.1

65.5

Minor 5ss

27.5

-2.6

3.2

31.7

42.2

Minor BPS

53.1

0.09

1.6

62.25

37.4

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886