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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51759802_51760336_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51759802 - 51760336

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGATCA

5'SS Class:

major

3'SS Sequence:

GTTTGTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTATTAG

U12 Branch Point Sequence:

ACCTGCATATCT

Flanking Amino Acid:

GHNGAGKTTTMSILTGLFPP

Intron Amino Acid Position:

944

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

73.4

31.4

Major BPS

60.8

0.27

1.6

60.1

46.3

Major PPT

84.2

0.77

0.8

81.3

36.4

Minor 5ss

40.7

-1

53.4

43.5

Minor BPS

44.8

-0.3

2.2

62.76

47.2

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886