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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51761117_51762215_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51761117 - 51762215

Intron Length:

1099

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGTTCA

5'SS Class:

major

3'SS Sequence:

TTGTGCCTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTGAAT

U12 Branch Point Sequence:

TCAGCCTGAATT

Flanking Amino Acid:

KLKARTSKLSGGMQRKLSVA

Intron Amino Acid Position:

1035

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

70.3

36.4

Major BPS

49.8

-0

1.4

61.2

Major PPT

71.3

0.48

41.4

Minor 5ss

39.2

-1.2

46.9

43.8

Minor BPS

61.5

0.44

1.6

73.5

43.6

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886