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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51763653_51764155_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51763653 - 51764155

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTCTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

ACCTTTTTCATT

Flanking Amino Acid:

SDHESDTLTIDVSAISNLIT

Intron Amino Acid Position:

1179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

100

1.24

0.5

100

Major PPT

77.8

0.63

0.9

70.2

41.3

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

49.9

0.07

1.7

64.47

41.5

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886