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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51765139_51766087_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51765139 - 51766087

Intron Length:

949

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

GCATTATTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

CTAACCGTAACT

Flanking Amino Acid:

DDSGVDAETSDGTLPARRNR

Intron Amino Acid Position:

1263

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

77.2

0.61

0.9

73.6

40.7

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

58.6

0.35

2.1

77.57

44.5

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886