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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51768546_51768702_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

51768546 - 51768702

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGGG

5'SS Class:

major

3'SS Sequence:

CCGGTGATACCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTCTAATGGATA

Flanking Amino Acid:

PGAGGLPPPQREQDTADILQ

Intron Amino Acid Position:

1488

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

60.8

44.4

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

56.9

0.16

1.1

47.5

43.8

Minor 5ss

28.4

-2.5

3.5

46.9

Minor BPS

46.1

-0.3

1.9

61.2

38.7

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886