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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51771372_51772545_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51771372 - 51772545

Intron Length:

1174

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TTTTTTTGTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACAAAC

U12 Branch Point Sequence:

AACATACAAACA

Flanking Amino Acid:

LTKQQLSEVALMTTSVDVLV

Intron Amino Acid Position:

1647

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

68.7

Major BPS

59.6

0.24

65.2

28.2

Major PPT

0.9

0.8

84.6

Minor 5ss

39.8

-1.1

3.1

61.7

42.2

Minor BPS

38.5

-0.8

45.29

36.9

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886