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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51773607_51774536_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51773607 - 51774536

Intron Length:

930

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTGTCTTAACA

Flanking Amino Acid:

TFVLELFTNNKLNNINDILK

Intron Amino Acid Position:

1794

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.2

36.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

81.4

0.71

0.9

77.5

35.6

Minor 5ss

41.2

-1

3.1

58.3

39.3

Minor BPS

0.97

1.2

86.69

32.1

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886