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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51774661_51775289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51774661 - 51775289

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CTTACCTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

CTTACCTTCACA

Flanking Amino Acid:

QAMADALERFGENRFVSPLS

Intron Amino Acid Position:

1835

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

28.8

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

78.2

0.64

0.8

71.9

32.5

Minor 5ss

32.1

-2

3.1

36.8

41.9

Minor BPS

65.9

0.49

1.8

75.92

41.5

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886