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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51775420_51775552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51775420 - 51775552

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTACCAT

U12 Branch Point Sequence:

GAGGCTTTACCA

Flanking Amino Acid:

LIQYRFFIKPRPVYAKLPPV

Intron Amino Acid Position:

1878

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.8

38.3

Major BPS

65.6

0.39

1.3

75.1

39.4

Major PPT

82.6

0.73

0.8

77.4

31.3

Minor 5ss

40.5

-1.1

3.2

58.3

46.4

Minor BPS

49.6

-0

1.7

56.64

42.9

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886