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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51775674_51775850_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51775674 - 51775850

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAAAA

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTTTTTTTCTCT

Flanking Amino Acid:

DILEIKELTKIYRMKRKPAV

Intron Amino Acid Position:

1919

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.6

Major BPS

79.2

0.73

75.3

39.4

Major PPT

86.3

0.82

0.8

83.9

31.1

Minor 5ss

32.9

-2

2.9

40.3

45.4

Minor BPS

45.5

-0.2

3.6

82.72

39.3

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886