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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51775914_51776375_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51775914 - 51776375

Intron Length:

462

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTTA

5'SS Class:

strong_major

3'SS Sequence:

TTTATATCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTTTTATATCC

Flanking Amino Acid:

RICVGIPPGECFGLLGVNGA

Intron Amino Acid Position:

1940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.8

84.1

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

78.6

0.64

0.9

70.5

40.1

Minor 5ss

47.4

-0.3

2.8

64.4

Minor BPS

49.8

-0

1.9

66.18

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886