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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51777036_51777808_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51777036 - 51777808

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTCAA

U12 Branch Point Sequence:

CTGTGCTCAATT

Flanking Amino Acid:

RGVPEKEVCKVGEWAIRKLG

Intron Amino Acid Position:

2023

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

74.2

0.6

0.9

75.7

Major PPT

79.2

0.66

0.8

77.4

31.3

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

52.9

0.17

71.61

45.8

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886