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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51779022_51779202_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51779022 - 51779202

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTATT

5'SS Class:

major

3'SS Sequence:

CTCTTGTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TCTTGTTTACAG

Flanking Amino Acid:

CLGSVQHLKNRFGDGYTIVV

Intron Amino Acid Position:

2133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

1.2

81.8

38.5

Major BPS

71.2

0.53

37.5

Major PPT

84.7

0.78

0.8

78.9

33.2

Minor 5ss

45.8

-0.4

68.3

42.6

Minor BPS

46.5

-0.4

2.1

55.63

Associated Gene:

Gene:

ABCA1

Ensembl Gene ID:

ENSAPLG00000014219

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015088

51707899 - 51779784

71886