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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51802344_51804397_R

Intron Information:

Intron Rank:

141228

Intron Class:

major

Intron Phase:

Intron Coordinates:

51802344 - 51804397

Intron Length:

2054

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTATC

5'SS Class:

strong_major

3'SS Sequence:

TCCTTACTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTATAAA

U12 Branch Point Sequence:

GTCTCCTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.9

0.92

0.9

85.3

32.2

Major BPS

66.3

0.4

1.1

34.4

Major PPT

79.6

0.67

0.8

77.7

29.9

Minor 5ss

39.9

-1.1

2.8

46.6

41.8

Minor BPS

68.4

0.66

1.6

80.32

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023323

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041590

51801251 - 51804529

3279