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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5181794_5182429_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5181794 - 5182429

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TAATTCCTAATT

Flanking Amino Acid:

EIIPLTNSIQKALHHVSHLK

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

70.1

0.45

0.9

68.1

37.1

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

63.6

0.51

1.6

78.63

37.3

Associated Gene:

Gene:

C18orf54

Ensembl Gene ID:

ENSAPLG00000010526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010951

5181664 - 5189941

8278