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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_5182504_5183256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5182504 - 5183256

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TGTTCCTCAGTT

Flanking Amino Acid:

TAEQKEEFEKLFEKGDAELK

Intron Amino Acid Position:

497

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.6

33.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

83.6

0.76

0.8

34.8

Minor 5ss

39.2

-1.2

2.8

51.8

Minor BPS

62.6

0.47

1.8

81.4

40.2

Associated Gene:

Gene:

C18orf54

Ensembl Gene ID:

ENSAPLG00000010526

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010951

5181664 - 5189941

8278