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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51848182_51850888_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51848182 - 51850888

Intron Length:

2707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GTGCTTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

ATGATTTTAATT

Flanking Amino Acid:

FTGMTLDYSLRSFFKAFSLI

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.5

35.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.1

0.59

0.9

73.8

36.9

Minor 5ss

32.9

-2

3.3

44.7

43.3

Minor BPS

64.9

0.55

1.2

74.15

37.3

Associated Gene:

Gene:

PSD3

Ensembl Gene ID:

ENSAPLG00000002837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030056

51847791 - 51908819

61029

ENSAPLT00000025566

51847791 - 51913688

65898

ENSAPLT00000002885

51845361 - 51904752

59392

ENSAPLT00000038422

51846627 - 51907819

61193