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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_51851002_51853601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

51851002 - 51853601

Intron Length:

2600

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTTG

5'SS Class:

strong_major

3'SS Sequence:

TGCCTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAT

U12 Branch Point Sequence:

TTGCATGTGACT

Flanking Amino Acid:

QCNPNTISSQDGVHCLTCAM

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

1.1

78.8

38.3

Major BPS

0.62

1.4

85.7

34.9

Major PPT

81.8

0.71

0.8

76.5

32.1

Minor 5ss

49.4

-0

2.5

66.9

44.4

Minor BPS

46.3

-0.2

2.2

69.18

42.1

Associated Gene:

Gene:

PSD3

Ensembl Gene ID:

ENSAPLG00000002837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038422

51846627 - 51907819

61193

ENSAPLT00000030056

51847791 - 51908819

61029

ENSAPLT00000025566

51847791 - 51913688

65898

ENSAPLT00000002885

51845361 - 51904752

59392